Whole Human Brain 10x scRNA-seq gene expression data#

  • 10x scRNA-seq clustering analysis and annotation: learn about the whole human brain taxonomy through some example use cases and visualization. [notebooks/WHB_cluster_annotation_tutorial.ipynb]

  • Part 1: understand the basic structure of the data and metadata, and visualize brain region and cell type annotations in a UMAP. [notebooks/10x_snRNASeq_tutorial_part_1.ipynb]

  • Part 2: explore the whole brain data through visualization and analyses of a set of genes of interest. [notebooks/10x_snRNASeq_tutorial_part_2.ipynb]