allensdk package

Subpackages

• allensdk.api package
  • Subpackages
    • allensdk.api.queries package
      • Submodules
        • allensdk.api.queries.annotated_section_data_sets_api module
        • allensdk.api.queries.biophysical_api module
        • allensdk.api.queries.brain_observatory_api module
        • allensdk.api.queries.cell_types_api module
        • allensdk.api.queries.connected_services module
        • allensdk.api.queries.glif_api module
        • allensdk.api.queries.grid_data_api module
        • allensdk.api.queries.image_download_api module
        • allensdk.api.queries.mouse_atlas_api module
        • allensdk.api.queries.mouse_connectivity_api module
        • allensdk.api.queries.ontologies_api module
        • allensdk.api.queries.reference_space_api module
        • allensdk.api.queries.rma_api module
        • allensdk.api.queries.rma_pager module
        • allensdk.api.queries.rma_template module
        • allensdk.api.queries.svg_api module
        • allensdk.api.queries.synchronization_api module
        • allensdk.api.queries.tree_search_api module
      • Module contents
  • Submodules
    • allensdk.api.api module
    • allensdk.api.cache module
  • Module contents
• allensdk.brain_observatory package
  • Subpackages
    • allensdk.brain_observatory.receptive_field_analysis package
      • Submodules
        • allensdk.brain_observatory.receptive_field_analysis.chisquarerf module
        • allensdk.brain_observatory.receptive_field_analysis.eventdetection module
        • allensdk.brain_observatory.receptive_field_analysis.fit_parameters module
        • allensdk.brain_observatory.receptive_field_analysis.fitgaussian2D module
        • allensdk.brain_observatory.receptive_field_analysis.postprocessing module
        • allensdk.brain_observatory.receptive_field_analysis.receptive_field module
        • allensdk.brain_observatory.receptive_field_analysis.tools module
        • allensdk.brain_observatory.receptive_field_analysis.utilities module
        • allensdk.brain_observatory.receptive_field_analysis.visualization module
      • Module contents
  • Submodules
    • allensdk.brain_observatory.brain_observatory_exceptions module
    • allensdk.brain_observatory.brain_observatory_plotting module
    • allensdk.brain_observatory.circle_plots module
    • allensdk.brain_observatory.demixer module
    • allensdk.brain_observatory.dff module
    • allensdk.brain_observatory.drifting_gratings module
    • allensdk.brain_observatory.findlevel module
    • allensdk.brain_observatory.locally_sparse_noise module
    • allensdk.brain_observatory.natural_movie module
    • allensdk.brain_observatory.natural_scenes module
    • allensdk.brain_observatory.observatory_plots module
    • allensdk.brain_observatory.r_neuropil module
    • allensdk.brain_observatory.roi_masks module
    • allensdk.brain_observatory.session_analysis module
    • allensdk.brain_observatory.static_gratings module
    • allensdk.brain_observatory.stimulus_analysis module
    • allensdk.brain_observatory.stimulus_info module
  • Module contents
• allensdk.config package
  • Subpackages
    • allensdk.config.app package
      • Submodules
        • allensdk.config.app.application_config module
      • Module contents
    • allensdk.config.model package
      • Subpackages
        • allensdk.config.model.formats package
          • Submodules
            • allensdk.config.model.formats.hdf5_util module
            • allensdk.config.model.formats.json_description_parser module
            • allensdk.config.model.formats.pycfg_description_parser module
          • Module contents
      • Submodules
        • allensdk.config.model.description module
        • allensdk.config.model.description_parser module
      • Module contents
  • Submodules
    • allensdk.config.manifest module
    • allensdk.config.manifest_builder module
  • Module contents
• allensdk.core package
  • Submodules
    • allensdk.core.brain_observatory_cache module
    • allensdk.core.brain_observatory_nwb_data_set module
    • allensdk.core.cell_types_cache module
    • allensdk.core.dat_utilities module
    • allensdk.core.h5_utilities module
    • allensdk.core.json_utilities module
    • allensdk.core.mouse_connectivity_cache module
    • allensdk.core.nwb_data_set module
    • allensdk.core.obj_utilities module
    • allensdk.core.ontology module
    • allensdk.core.reference_space module
    • allensdk.core.reference_space_cache module
    • allensdk.core.simple_tree module
    • allensdk.core.sitk_utilities module
    • allensdk.core.structure_tree module
    • allensdk.core.swc module
  • Module contents
• allensdk.ephys package
  • Submodules
    • allensdk.ephys.ephys_extractor module
    • allensdk.ephys.ephys_features module
    • allensdk.ephys.extract_cell_features module
    • allensdk.ephys.feature_extractor module
  • Module contents
• allensdk.model package
  • Subpackages
    • allensdk.model.biophys_sim package
      • Subpackages
        • allensdk.model.biophys_sim.neuron package
          • Submodules
            • allensdk.model.biophys_sim.neuron.hoc_utils module
          • Module contents
        • allensdk.model.biophys_sim.scripts package
          • Module contents
      • Submodules
        • allensdk.model.biophys_sim.bps_command module
        • allensdk.model.biophys_sim.config module
      • Module contents
    • allensdk.model.biophysical package
      • Submodules
        • allensdk.model.biophysical.run_simulate module
        • allensdk.model.biophysical.runner module
        • allensdk.model.biophysical.utils module
      • Module contents
    • allensdk.model.glif package
      • Submodules
        • allensdk.model.glif.glif_neuron module
        • allensdk.model.glif.glif_neuron_methods module
        • allensdk.model.glif.simulate_neuron module
      • Module contents
  • Module contents
• allensdk.morphology package
  • Submodules
    • allensdk.morphology.validate_swc module
  • Module contents
• allensdk.test_utilities package
  • Submodules
    • allensdk.test_utilities.temp_dir module
  • Module contents

Submodules

• allensdk.deprecated module

Module contents