This function applies patchseqQC, given a taxonomy and query data

This function applies patchseqQC, given a taxonomy and query data

applyPatchseqQC(AIT.anndata, query.data, query.metadata, verbose = FALSE)

Arguments

AIT.anndata

A reference taxonomy object.

query.data

A count or CPM matrix for the query data.

query.metadata

A data frame of metadata for the query data.

verbose

Should status be printed to the screen?

Value

A new query.metadata file with appended QC columns