Select joint genes

Select joint genes

select_joint_genes(
  comb.dat,
  ref.list,
  select.cells = comb.dat$all.cells,
  maxGenes = 2000,
  vg.padj.th = 0.5,
  max.dim = 20,
  use.markers = TRUE,
  top.n = 100,
  rm.eigen = NULL,
  rm.th = rep(0.7, ncol(rm.eigen))
)

Arguments

comb.dat

ref.list

select.cells

maxGenes

vg.padj.th

max.dim

use.markers

top.n

rm.eigen

rm.th