Plot low-quality clusters

Plot low-quality clusters

plot_low_qc(norm.dat, cl, low.df, nn.df, de.genes, all.col)

Arguments

cl

A cluster factor object for all cells.

low.df

a data.frame with results from find_low_quality_cl().

nn.df

de.genes

differential gene expression results like those generated by de_score().

all.col

norm.data

normalized data matrix for clustered cells.