knn joint

knn joint

knn_joint(
  comb.dat,
  ref.sets = names(comb.dat$dat.list),
  select.sets = names(comb.dat$dat.list),
  merge.sets = ref.sets,
  select.cells = comb.dat$all.cells,
  select.genes = NULL,
  method = "cor",
  self.method = "RANN",
  k = 15,
  sample.size = 5000,
  cl.sample.size = 100,
  batch.size = 10000,
  verbose = TRUE,
  mc.cores = 1,
  ...
)

Arguments

comb.dat

ref.sets

select.sets

merge.sets

select.cells

select.genes

method

self.method

k

sample.size

cl.sample.size

batch.size

verbose

mc.cores

...