Compute differential expression summary statistics based on a differential results data.frame and de_param().

de_stats_pair(
  df,
  de.param = de_param(),
  cl.size1 = NULL,
  cl.size2 = NULL,
  select.genes = NULL
)

Arguments

df

A data.frame of pairwise differential expression results (i.e. from score_selected_pairs()).

de.param

A list of differential gene expression parameters from de_param()

cl.size1

Optional: The number of samples in the first/high cluster

cl.size2

Optional: The number of samples in the second/low cluster