get_aba_ish_structure_data.Rd
Get per-structure ABA RNA ISH results for a specific SectionDataSet
get_aba_ish_structure_data(api_id, keep_non_atlas = FALSE)
api_id | The ID of the SectionDataSet to retrieve |
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keep_non_atlas | Logical, whether to keep or filter structures without an atlas id value. Default = FALSE. |
a data.frame with per-structure atlas expression values:
name: full name of the atlas structure
acronym: structure acronym
atlas_id: atlas id value for structure
density: normalized expression density value
energy: normalized expression as intensity/density
sum_expressing_pixel_intensity
sum_expressing_pixels
sum_pixel_intensity
sum_pixels
voxel_energy_mean
voxel_energy_cv