Get per-structure ABA RNA ISH results for a specific SectionDataSet

get_aba_ish_structure_data(api_id, keep_non_atlas = FALSE)

Arguments

api_id

The ID of the SectionDataSet to retrieve

keep_non_atlas

Logical, whether to keep or filter structures without an atlas id value. Default = FALSE.

Value

a data.frame with per-structure atlas expression values:

  • name: full name of the atlas structure

  • acronym: structure acronym

  • atlas_id: atlas id value for structure

  • density: normalized expression density value

  • energy: normalized expression as intensity/density

  • sum_expressing_pixel_intensity

  • sum_expressing_pixels

  • sum_pixel_intensity

  • sum_pixels

  • voxel_energy_mean

  • voxel_energy_cv