Retrieve gridded ABA RNA ISH results for a specific SectionDataSet

Retrieve gridded ABA RNA ISH results for a specific SectionDataSet

get_aba_ish_data(api_id, values = "energy")

Arguments

api_id

The ID of the SectionDataSet to retrieve
values

Which values to retrieve. Options are "energy", "density", "intensity", and "injection". Default = "energy".

Value

a 3d array with values for each position in the ABA mouse gridAnnotation space at 200 um resolution. Dimension are:

  • x, 67: anterior/posterior

  • y, 41: superior/inferior

  • z, 58: left/right