Clean up taxons by removing structures no longer present after filtering

Clean up taxons by removing structures no longer present after filtering

cleanup_taxons(flat_ontology, id_column = "id",
  taxon_column = "taxons")

Arguments

flat_ontology	A flat ontology data.frame generated by flatten_mba_ontology.
id_column	The id column used to link structures. default is "id".
taxon_column	The name of the column with taxons generated by generate_taxons().

Value

a data.frame with a modified taxons column that lacks any ids that are no longer present in the ontology.