abbreviation_term abbreviation_meaning abbreviation_type primary_identifier secondary_identifier
ACx allocortex anatomical DHBA:10292
ADARB2 adenosine deaminase RNA specific B2 (inactive) gene ENSEMBL:ENSG00000185736
AMY amygdaloid complex anatomical DHBA:10361
Astro astrocyte cell_type CL:0000127
Astrocyte astrocyte cell_type CL:0000127
B cells B cell cell_type CL:0000236
BAM border-associated macrophage cell_type CL:4042003
BF basal forebrain anatomical DHBA:10349
BNST bed nucleus of stria terminalis anatomical DHBA:10384
CALB1 calbindin 1 gene ENSEMBL:ENSG00000104327
CGE caudal ganglionic eminence anatomical DHBA:10552 UBERON:0004026
CHODL chondrolectin gene ENSEMBL:ENSG00000154645
CN cerebral nuclei anatomical DHBA:10331 UBERON:0004025
COP committed oligodendrocyte precursor cell_type CL:4023059
CTXND1 cortexin domain containing 1 gene ENSEMBL:ENSG00000259417
CXCL14 C-X-C motif chemokine ligand 14 gene ENSEMBL:ENSG00000145824
Cholinergic cholinergic neuron cell_type CL:0000108
Cx cerebral cortex anatomical DHBA:10159
D1 D1 medium spiny neuron cell_type CL:4030051
D1 ICj Island of Calleja granule cell cell_type CL:4030053
D1 MSN D1 medium spiny neuron cell_type CL:4030051
D1 Matrix MSN D1 medium spiny neuron, matrix cell_type CL:4030043
D1 NUDAP MSN D1 medium spiny neuron, neurochemically unique domains in the accumbens and putamen cell_type CL:4030054
D1 Striosome MSN D1 medium spiny neuron, striosomal cell_type CL:4030048
D1D2 Hybrid MSN D1/D2-hybrid medium spiny neuron cell_type CL:4030050
D2 MSN D2 medium spiny neuron cell_type CL:4030052
D2 Matrix MSN D2 medium spiny neuron, matrix cell_type CL:4030047
D2 StrioMat Hybrid MSN D2 medium spiny neuron, matrix/striosomal hybrid cell_type
D2 Striosome MSN D2 medium spiny neuron, striosomal cell_type CL:4030049
Dopa dopaminergic neuron cell_type CL:0000700
EBF2 EBF transcription factor 2 gene ENSEMBL:ENSG00000221818
Endo endothelial cell cell_type CL:0000115
Epen ependymal cell cell_type CL:0000065
Ependymal ependymal cell cell_type CL:0000065
F forebrain (prosencephalon) anatomical DHBA:10156 UBERON:0004024
FRMD7 FERM domain containing 7 gene ENSEMBL:ENSG00000165694
FS fast spiking neuron cell_type
GABA GABAergic neuron cell_type CL:0000617
GAD2 glutamate decarboxylase 2 gene ENSEMBL:ENSG00000136750
GATA3 GATA binding protein 3 gene ENSEMBL:ENSG00000107485
GBX1 gastrulation brain homeobox 1 gene ENSEMBL:ENSG00000164900
GPe external segment of globus pallidus anatomical DHBA:10343
GPi Core internal division of globus pallidus, medial (central) portion anatomical DHBA:11548
GPi Shell internal division of globus pallidus, lateral (peripheral) portion anatomical DHBA:11549
GPin interstitial cholinergic nucleus of globus pallidus anatomical DHBA:AA30205
Glut glutamatergic neuron cell_type CL:0000679
Granular granule cell cell_type CL:0000120
HTH hypothalamus anatomical DHBA:10467
Hybrid MSN D1/D2-hybrid medium spiny neuron cell_type CL:4030050
ImAstro immune astrocyte cell_type
ImOligo immune oligodendrocyte cell_type
Immune leukocyte cell_type CL:0000738
LAMP5 lysosomal associated membrane protein family member 5 gene ENSEMBL:ENSG00000125869
LGE lateral ganglionic eminence anatomical DHBA:10551 UBERON:0004025
LHX6 LIM homeobox 6 gene ENSEMBL:ENSG00000106852
LHX8 LIM homeobox 8 gene ENSEMBL:ENSG00000162624
LYPD6 LY6/PLAUR domain containing 6 gene ENSEMBL:ENSG00000187123
Lymphocyte lymphocyte cell_type CL:0000542
M midbrain (mesencephalon) anatomical DHBA:10648 UBERON:0001891
MEIS2 Meis homeobox 2 gene ENSEMBL:ENSG00000134138
MGE medial ganglionic eminence anatomical DHBA:10550 UBERON:0004024
Macrophage macrophage cell_type CL:0000235
Microglia microglial cell cell_type CL:0000129
Monocyte monocyte cell_type CL:0000576
NDB nucleus of diagonal band anatomical DHBA:10354 UBERON:0001879
Nonneuron non-neuronal cell cell_type
OB olfactory bulb anatomical DHBA:10307
ONECUT1 one cut homeobox 1 gene ENSEMBL:ENSG00000169856
OPALIN oligodendrocytic myelin paranodal and inner loop protein gene ENSEMBL:ENSG00000197430
OPC oligodendrocyte precursor cell cell_type CL:0002453
OT olfactory tubercle anatomical DHBA:10310 UBERON:0001883
Oligo oligodendrocyte cell_type CL:0000128
Oligodendrocyte oligodendrocyte cell_type CL:0000128
PAX7 paired box 7 gene ENSEMBL:ENSG00000009709
PAX8 paired box 8 gene ENSEMBL:ENSG00000125618
PITX2 paired like homeodomain 2 gene ENSEMBL:ENSG00000164093
PLEKHG1 pleckstrin homology and RhoGEF domain containing G1 gene ENSEMBL:ENSG00000120278
PLPP4 phospholipid phosphatase 4 gene ENSEMBL:ENSG00000203805
PTHLH parathyroid hormone like hormone gene ENSEMBL:ENSG00000087494
PVALB parvalbumin gene ENSEMBL:ENSG00000100362
Pericyte pericyte cell_type CL:0000669
RSPO2 R-spondin 2 gene ENSEMBL:ENSG00000147655
SEMA5A semaphorin 5A gene ENSEMBL:ENSG00000112902
SI substantia innominata anatomical DHBA:13034 UBERON:0003017
SKOR1 SKI family transcriptional corepressor 1 gene ENSEMBL:ENSG00000188779
SLEA sublenticular extended amygdala anatomical DHBA:10387
SMC smooth muscle cell cell_type CL:0000192
SN substantia nigra anatomical DHBA:12251 UBERON:0002038
SOX6 SRY-box transcription factor 6 gene ENSEMBL:ENSG00000110693
SST somatostatin gene ENSEMBL:ENSG00000157005
ST18 ST18 C2H2C-type zinc finger transcription factor gene ENSEMBL:ENSG00000147488
STH subthalamic nucleus anatomical DHBA:10466 UBERON:0001906
STR striatum anatomical DHBA:10333 UBERON:0002435
STRd dorsal striatum (caudoputamen complex-CP, STRd) anatomical DHBA:AA30192 UBERON:0005382
STRv ventral striatum (STRv) anatomical DHBA:AA30195 UBERON:0005403
Sero serotonergic neuron cell_type CL:0000850
Subpallium subpallium anatomical UBERON:0000204
T cells T cell cell_type CL:0000084
TAC3 tachykinin precursor 3 gene ENSEMBL:ENSG00000166863
TCF7L2 transcription factor 7 like 2 gene ENSEMBL:ENSG00000148737
VIP vasoactive intestinal peptide gene ENSEMBL:ENSG00000146469
VLMC vascular leptomeningeal cell cell_type CL:4023051
VTR ventral tegmental region of midbrain anatomical DHBA:146034938
Vascular vascular system anatomical UBERON:0007798
ZI zona incerta anatomical DHBA:10463
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